PPDB

The Plant Proteome Database

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AT5G50650.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50550.1 11Arabidopsis thaliana03831001000 (0)_
AT2G01470.1 11Arabidopsis thaliana0383758621 (21)_
AT3G52190.1 11Arabidopsis thaliana1E-3131329490 (0)C
Os11g39650.1 7Oryza sativa2E-8638740574 (4)M
Os07g09000.1 7Oryza sativa2E-5032433490 (0)_
Os03g58570.1 7Oryza sativa3E-3023231500 (0)M
Zm00001eb166990_P002 agpv5Zea mays3E-8837443610 (0)M
GRMZM2G011364_P01 3.21Zea mays3E-8837443610 (0)M
v1_GRMZM2G011364_P01 4a53Zea mays3E-8837443610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) Ge1_WD40(3) Lgl_C(2) WD40(4)
TargetP: Cytoplasm (Class 3 C0.078; M0.223; S0.055; _0.798)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 383 aa (-cTP 311)
Molecular Weight 42.08 kDA(-cTP )
PI 5.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help