PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G50590.1   hydroxysteroid dehydrogenase 4
Lab Annot.
Mapman: 26.22 misc.short chain dehydrogenase/reductase (SDR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50690.1 11Arabidopsis thaliana02991001000 (0)S
AT5G50590.2 11Arabidopsis thaliana3E-1782411001000 (0)S
AT5G50690.2 11Arabidopsis thaliana3E-1782411001000 (0)S
Os04g32070.1 7Oryza sativa6E-8128346621 (1)_
Os12g27830.1 7Oryza sativa1E-7530242590 (0)S
Os02g30714.1 7Oryza sativa3E-6730440590 (0)S
Zm00001eb085290_P002 agpv5Zea mays3E-7827846640 (0)_
Zm00001eb085280_P003 agpv5Zea mays4E-7629143620 (0)M
v1_GRMZM2G108338_P01 4a53Zea mays4E-7629143620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: adh_short(1) adh_short_C2(1) DFP(2) KR(1)
TargetP: Secreted (Class 1 C0.002; M0.035; S0.986; _0.140)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 299 aa (-cTP 259)
Molecular Weight 33.25 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help