PPDB

The Plant Proteome Database

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AT5G50450.1   HCP-like superfamily protein with MYND-type zinc finger

Lab Annot. HCP-like protein with MYND-type zinc finger
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G67340.1 11Arabidopsis thaliana7E-13633859720 (0)M
Os01g69270.1 7Oryza sativa6E-10033153660 (0)M
Os04g31610.1 7Oryza sativa4E-9932854650 (0)_
Os11g29710.1 7Oryza sativa6E-9330149630 (0)M
v1_GRMZM2G133428_P02 4a53Zea mays2E-9933851650 (0)_
Zm00001eb143150_P001 agpv5Zea mays2E-9933851650 (0)_
GRMZM2G133428_P02 3.21Zea mays2E-9933851650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sel1(3) zf-MYND(1)
TargetP: Cytoplasm (Class 2 C0.139; M0.083; S0.021; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 336 aa (-cTP 259)
Molecular Weight 36.81 kDA(-cTP )
PI 8.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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