PPDB

PPDB	The Plant Proteome Database

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AT5G50390.1 Pentatricopeptide repeat (PPR-like) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G02010.1 11 Arabidopsis thaliana 9E-137 581 37 58 0 (0) M
AT3G24000.1 11 Arabidopsis thaliana 4E-136 576 35 59 0 (0) M
AT3G13770.1 11 Arabidopsis thaliana 2E-130 605 35 56 0 (0) M
Os08g04400.1 7 Oryza sativa 0 616 45 65 0 (0) C
Os06g41040.1 7 Oryza sativa 3E-133 576 35 58 0 (0) _
Os10g30760.1 7 Oryza sativa 7E-133 576 35 59 0 (0) M
v1_GRMZM2G064501_P01 4a53 Zea mays 0 663 44 62 0 (0) C
GRMZM2G064501_P01 3.21 Zea mays 0 663 44 62 0 (0) C
v1_GRMZM2G163396_P01 4a53 Zea mays 2E-131 599 36 58 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(1) PPR(11) PPR_1(10) PPR_2(10) PPR_3(6) PPR_long(3) TPR_14(2)
TargetP:	Chloroplast (Class 4 C0.815; M0.046; S0.004; _0.433)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	701 aa (-cTP 654)
Molecular Weight	79.76 kDA(-cTP 74.15)
PI	6.50(-cTP 5.90)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data