PPDB

PPDB	The Plant Proteome Database

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AT5G50340.1 DNA repair protein RadA-like protein

Lab Annot.

unknown function (very weak LON)
Mapman: 35 not assigned

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G50340.3 11 Arabidopsis thaliana 0 627 100 100 0 (0) _
AT5G50340.2 11 Arabidopsis thaliana 0 587 100 100 0 (0) M
Os06g05820.1 7 Oryza sativa 0 523 57 76 0 (0) C
GRMZM2G062638_P01 3.21 Zea mays 0 487 60 78 1 (1) M
Zm00001eb270700_P005 agpv5 Zea mays 0 487 60 78 0 (0) M
v1_GRMZM2G062638_P01 4a53 Zea mays 0 487 60 78 1 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_14(1) AAA_16(1) AAA_19(1) AAA_22(1) AAA_24(1) AAA_25(1) ABC_tran(1) A
TargetP:	Cytoplasm (Class 4 C0.083; M0.297; S0.002; _0.648)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	627 aa (-cTP 625)
Molecular Weight	67.65 kDA(-cTP )
PI	8.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type
2287	Detail								[A. thaliana]		Clp C1 WT
2289	Detail								[A. thaliana]		Clp C1 TRAP
2290	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data