PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G50330.1   Protein kinase superfamily protein
Lab Annot. ABC1 kinase 12B (ABC1K12B) (likely mitochondria)
Mapman: 26.56* misc.ABC1k family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50330.2 11Arabidopsis thaliana047996961 (1)_
AT4G24810.2 11Arabidopsis thaliana047880919 (9)_
AT4G24810.1 11Arabidopsis thaliana043579919 (9)_
Os01g67720.1 7Oryza sativa045463790 (0)_
Os01g67720.3 7Oryza sativa4E-15432064790 (0)_
Os01g67720.2 7Oryza sativa5E-15331665790 (0)_
Zm00001eb365530_P003 agpv5Zea mays041462780 (0)M
Zm00001eb144330_P001 agpv5Zea mays040762780 (0)M
GRMZM5G884972_P02 3.21Zea mays047063793 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ABC1(1) APH(3) Pkinase(2) RIO1(2)
TargetP: Cytoplasm (Class 3 C0.045; M0.314; S0.050; _0.859)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 479 aa (-cTP 436)
Molecular Weight 54.63 kDA(-cTP )
PI 9.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help