PPDB

PPDB	The Plant Proteome Database

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AT5G50200.1 nitrate transmembrane transporter

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G50200.3 11 Arabidopsis thaliana 9E-156 210 100 100 1 (1) S
AT5G50200.2 11 Arabidopsis thaliana 9E-156 210 100 100 1 (1) S
AT4G24715.1 11 Arabidopsis thaliana 2E-88 210 62 76 0 (0) S
Os02g38230.1 7 Oryza sativa 3E-48 156 52 66 0 (0) S
Os04g40410.1 7 Oryza sativa 2E-39 159 45 62 0 (0) S
Zm00001eb246140_P001 agpv5 Zea mays 2E-46 170 49 64 0 (0) S
v1_GRMZM2G179294_P01 4a53 Zea mays 2E-46 170 49 64 0 (0) S
GRMZM2G179294_P01 3.21 Zea mays 2E-46 170 49 64 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GPI-anchored(2) NAR2(1)
TargetP:	Secreted (Class 1 C0.029; M0.032; S0.942; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	210 aa (-cTP 189)
Molecular Weight	23.40 kDA(-cTP )
PI	9.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data