PPDB

The Plant Proteome Database

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AT5G50150.1   NEP-interacting protein%2C putative (DUF239)

Lab Annot. Protein of Unknown Function (DUF239)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G23340.1 11Arabidopsis thaliana041769790 (0)S
AT1G23340.2 11Arabidopsis thaliana041769790 (0)S
AT1G70550.1 11Arabidopsis thaliana037772830 (0)M
Os06g28000.1 7Oryza sativa038669810 (0)S
Os01g36660.1 7Oryza sativa038868810 (0)S
Os01g07570.1 7Oryza sativa038467790 (0)S
Zm00001eb382380_P003 agpv5Zea mays038869800 (0)S
GRMZM2G129947_P01 3.21Zea mays038369810 (0)S
v1_GRMZM2G150962_P01 4a53Zea mays039365760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Neprosin(1) Neprosin_AP(1)
TargetP: Chloroplast (Class 5 C0.511; M0.020; S0.366; _0.053)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 420 aa (-cTP 417)
Molecular Weight 47.03 kDA(-cTP 46.74)
PI 9.07(-cTP 9.07)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data


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