PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G50150.1 NEP-interacting protein%2C putative (DUF239)

Lab Annot.

Protein of Unknown Function (DUF239)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G23340.1 11 Arabidopsis thaliana 0 417 69 79 0 (0) S
AT1G23340.2 11 Arabidopsis thaliana 0 417 69 79 0 (0) S
AT1G70550.1 11 Arabidopsis thaliana 0 377 72 83 0 (0) M
Os06g28000.1 7 Oryza sativa 0 386 69 81 0 (0) S
Os01g36660.1 7 Oryza sativa 0 388 68 81 0 (0) S
Os01g07570.1 7 Oryza sativa 0 384 67 79 0 (0) S
Zm00001eb382380_P003 agpv5 Zea mays 0 388 69 80 0 (0) S
GRMZM2G129947_P01 3.21 Zea mays 0 383 69 81 0 (0) S
v1_GRMZM2G150962_P01 4a53 Zea mays 0 393 65 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Neprosin(1) Neprosin_AP(1)
TargetP:	Chloroplast (Class 5 C0.511; M0.020; S0.366; _0.053)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	420 aa (-cTP 417)
Molecular Weight	47.03 kDA(-cTP 46.74)
PI	9.07(-cTP 9.07)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data