PPDB

 The Plant Proteome Database

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AT5G50020.1   DHHC-type zinc finger family protein
Lab Annot. DHHC-type zinc finger protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50020.3 11Arabidopsis thaliana041498980 (0)_
AT5G50020.2 11Arabidopsis thaliana041498980 (0)_
AT4G24630.1 11Arabidopsis thaliana041670810 (0)_
Os05g36090.1 7Oryza sativa2E-15642154670 (0)_
Os01g64810.2 7Oryza sativa2E-15140055690 (0)_
Os01g64810.1 7Oryza sativa2E-15140055690 (0)_
GRMZM2G100641_P01 3.21Zea mays3E-15542254660 (0)_
Zm00001eb289180_P001 agpv5Zea mays3E-15542254660 (0)_
v1_GRMZM2G100641_P01 4a53Zea mays3E-15542254660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Colicin_im(2) DHHC(2) DUF2162(2) UPF0542(1)
TargetP: Cytoplasm (Class 4 C0.004; M0.499; S0.007; _0.805)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 407 aa (-cTP 359)
Molecular Weight 47.10 kDA(-cTP )
PI 6.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help