PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G49990.1   Xanthine/uracil permease family protein

Lab Annot.
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49990.2 11Arabidopsis thaliana05281001000 (0)_
AT5G49990.3 11Arabidopsis thaliana05281001000 (0)_
AT5G49990.4 11Arabidopsis thaliana05281001000 (0)_
Os03g60880.2 7Oryza sativa052875860 (0)_
Os03g60880.1 7Oryza sativa052875860 (0)_
Os09g21340.1 7Oryza sativa052872850 (0)_
GRMZM2G045781_P02 3.21Zea mays052874865 (5)_
Zm00001eb062920_P001 agpv5Zea mays052874860 (0)_
v1_GRMZM2G045781_P02 4a53Zea mays052874866 (6)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4181(2) Xan_ur_permease(1)
TargetP: Cytoplasm (Class 1 C0.056; M0.053; S0.053; _0.962)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 12 TMs
TAT position:
Length 528 aa (-cTP 469)
Molecular Weight 57.32 kDA(-cTP )
PI 9.57(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help