PPDB

PPDB	The Plant Proteome Database

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AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase

Lab Annot.

pyridoxamine 5'-phosphate oxidase-related
Mapman: 18.20* Co-factor and vitamine metabolism.vitamin b6

Curated Location

plastid (Pubmed: 23198870 21051239 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G49970.2 11 Arabidopsis thaliana 0 477 97 97 47 (20) C
Os10g23120.1 7 Oryza sativa 0 487 70 82 0 (0) C
Zm00001eb027880_P002 agpv5 Zea mays 0 458 73 86 0 (0) C
GRMZM2G061988_P01 3.21 Zea mays 0 458 73 86 10 (9) _
v1_GRMZM2G061988_P01 4a53 Zea mays 0 458 73 86 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PNP_phzG_C(1) Putative_PNPOx(1) Pyrid_ox_like(1) Pyridox_oxase_2(1) YjeF_N(1)
TargetP:	Chloroplast (Class 5 C0.542; M0.363; S0.006; _0.018)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	530 aa (-cTP 467)
Molecular Weight	59.38 kDA(-cTP 52.34)
PI	6.91(-cTP 5.86)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1542	Detail								leaf [A. thaliana]		wild-type
2000	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2313	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2314	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2316	Detail								leaf [A. thaliana]	PG plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
21311031(mitochondria)
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data