PPDB

The Plant Proteome Database

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AT5G49945.1   hypothetical protein (DUF1682)

Lab Annot. unknown function (DUF1682)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G24330.1 11Arabidopsis thaliana0488688254 (53)S
Os05g35710.2 7Oryza sativa1E-164387597822 (22)S
Os05g35710.1 7Oryza sativa1E-164387597822 (22)S
Os05g35710.3 7Oryza sativa4E-9124556742 (2)S
GRMZM2G110141_P01 3.21Zea mays2E-16848353684 (4)S
v1_GRMZM2G110141_P01 4a53Zea mays2E-16848353686 (6)S
Zm00001eb289240_P001 agpv5Zea mays2E-16848353680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cdh1_DBD_1(1) DUF1682(1) DUF3619(2)
TargetP: Secreted (Class 1 C0.006; M0.049; S0.964; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 480 aa (-cTP 460)
Molecular Weight 54.59 kDA(-cTP )
PI 6.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help