PPDB

The Plant Proteome Database

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AT5G49665.1   Zinc finger (C3HC4-type RING finger) family protein

Lab Annot. Zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22680.1 11Arabidopsis thaliana1E-13878938540 (0)_
AT4G37890.2 11Arabidopsis thaliana3E-12778738541 (1)_
AT4G37890.1 11Arabidopsis thaliana2E-12481537521 (1)_
Os04g01160.1 7Oryza sativa4E-12679340530 (0)M
Os02g56280.1 7Oryza sativa8E-6860431480 (0)_
Os02g40664.1 7Oryza sativa2E-6563330480 (0)M
Zm00001eb418990_P001 agpv5Zea mays3E-14480542550 (0)_
Zm00001eb089670_P002 agpv5Zea mays3E-13580741550 (0)_
Zm00001eb089670_P003 agpv5Zea mays2E-11668241560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1677(2) FANCL_C(1) PHD(1) VWA(1) VWA_2(1) VWA_3(1) zf-ANAPC11(1) zf-C3HC4(1)
TargetP: Mitochondria (Class 5 C0.174; M0.490; S0.000; _0.339)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 740 aa (-cTP 656)
Molecular Weight 80.24 kDA(-cTP )
PI 9.34(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help