PPDB

The Plant Proteome Database

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AT5G49510.1   prefoldin 3

Lab Annot. VHL binding protein, putative / prefoldin, putative
Mapman: 29.6 protein.folding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49510.2 11Arabidopsis thaliana7E-14419510010015 (11)_
Os12g37590.1 7Oryza sativa1E-107180829029 (29)C
Zm00001eb136920_P001 agpv5Zea mays1E-10518379880 (0)_
v1_GRMZM2G102580_P01 4a53Zea mays1E-105183798841 (40)_
GRMZM2G102580_P01 3.21Zea mays1E-105183798844 (42)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CE2_N(1) HrpB7(2) Prefoldin(1)
TargetP: Cytoplasm (Class 5 C0.475; M0.084; S0.060; _0.671)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 195 aa (-cTP 193)
Molecular Weight 21.47 kDA(-cTP )
PI 4.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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