PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G49500.1 Signal recognition particle%2C SRP54 subunit protein

Lab Annot.

SRP54
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48900.1 11 Arabidopsis thaliana 0 497 85 91 7 (2) _
AT5G49500.2 11 Arabidopsis thaliana 0 375 100 100 0 (0) M
AT1G48900.2 11 Arabidopsis thaliana 0 420 87 92 6 (2) _
Os01g56600.1 7 Oryza sativa 0 484 76 87 7 (7) _
Os05g43390.1 7 Oryza sativa 0 484 66 81 0 (0) _
Os11g05556.2 7 Oryza sativa 9E-56 427 28 50 18 (18) _
GRMZM2G038953_P02 3.21 Zea mays 0 484 72 83 3 (3) _
v1_GRMZM2G038953_P02 4a53 Zea mays 0 484 72 83 3 (3) _
Zm00001eb151790_P003 agpv5 Zea mays 0 484 72 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	COMMD1_N(2) Fe-ADH(1) MMR_HSR1(1) RuvC_1(3) SRP_SPB(2) SRP54(1) SRP54_N(1)
TargetP:	Cytoplasm (Class 2 C0.050; M0.067; S0.163; _0.797)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	497 aa (-cTP 494)
Molecular Weight	55.26 kDA(-cTP )
PI	9.16(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19452453(14-3-3-interacting proteins)

Comparative Proteomics Data