PPDB

The Plant Proteome Database

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AT5G49420.1   MADS-box transcription factor family protein

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38620.1 11Arabidopsis thaliana036078820 (0)_
AT5G49490.1 11Arabidopsis thaliana4E-9523265720 (0)M
AT5G04640.1 11Arabidopsis thaliana5E-4836336510 (0)_
Os12g21850.1 7Oryza sativa2E-1110836540 (0)_
Os12g21880.1 7Oryza sativa3E-099537620 (0)_
Os02g06860.1 7Oryza sativa6E-088234620 (0)_
GRMZM2G073357_P01 3.21Zea mays8E-117742660 (0)_
Zm00001eb286420_P001 agpv5Zea mays8E-117742660 (0)_
v1_GRMZM2G073357_P01 4a53Zea mays8E-117742660 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SRF-TF(1)
TargetP: Cytoplasm (Class 3 C0.091; M0.263; S0.012; _0.734)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 334 aa (-cTP 258)
Molecular Weight 37.40 kDA(-cTP )
PI 4.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help