PPDB

The Plant Proteome Database

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AT5G49400.1   zinc knuckle (CCHC-type) family protein

Lab Annot. zinc knuckle (CCHC-type) protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g09310.1 7Oryza sativa3E-5613078860 (0)_
Zm00001eb109890_P001 agpv5Zea mays7E-5913077830 (0)_
GRMZM2G075744_P01 3.21Zea mays7E-5913077830 (0)_
v1_GRMZM2G075744_P01 4a53Zea mays7E-5913077830 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: zf-CCHC(1) zf-CCHC_3(2)
TargetP: Cytoplasm (Class 4 C0.153; M0.288; S0.135; _0.653)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 275 aa (-cTP 258)
Molecular Weight 31.09 kDA(-cTP )
PI 9.77(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1544Detail       leaf [A. thaliana] TiO2 thylakoid membranek1xk3

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help