PPDB

The Plant Proteome Database

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AT5G49380.1   CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana protein match is: binding (TAIR:AT3G06670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49390.2 11Arabidopsis thaliana3E-15121299990 (0)_
AT5G49390.1 11Arabidopsis thaliana1E-12320790910 (0)_
AT3G06670.1 11Arabidopsis thaliana9E-7219164791 (0)_
Os01g23590.3 7Oryza sativa3E-5519150700 (0)_
Os01g23590.2 7Oryza sativa6E-5519150700 (0)_
Os01g23590.1 7Oryza sativa7E-52191507013 (13)_
Zm00001eb131230_P001 agpv5Zea mays3E-4919148700 (0)_
Zm00001eb340940_P001 agpv5Zea mays1E-4719147690 (0)_
Zm00001eb340940_P003 agpv5Zea mays4E-4219145670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF625(1)
TargetP: Cytoplasm (Class 4 C0.042; M0.305; S0.177; _0.635)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 207)
Molecular Weight 25.32 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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