PPDB

PPDB	The Plant Proteome Database

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AT5G49270.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family

Lab Annot.

Mapman: 15 metal handling

Curated Location

TAIR curated location: anchored to membrane0012376623,12068095,12805597

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G16120.1 11 Arabidopsis thaliana 0 600 67 79 1 (1) S
AT3G16860.1 11 Arabidopsis thaliana 0 621 61 77 0 (0) S
AT3G20580.1 11 Arabidopsis thaliana 0 621 49 67 0 (0) S
Os03g18910.1 7 Oryza sativa 0 615 50 66 0 (0) S
Os06g47110.1 7 Oryza sativa 0 603 49 68 0 (0) S
Os07g49080.1 7 Oryza sativa 0 615 47 63 0 (0) S
v1_GRMZM2G353276_P01 4a53 Zea mays 0 659 45 62 0 (0) S
GRMZM2G353276_P01 3.21 Zea mays 0 659 45 62 0 (0) S
GRMZM2G056627_P01 3.21 Zea mays 0 624 47 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBM_2(3) COBRA(1)
TargetP:	Secreted (Class 2 C0.055; M0.096; S0.848; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	663 aa (-cTP 631)
Molecular Weight	73.14 kDA(-cTP )
PI	5.51(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data