PPDB

PPDB	The Plant Proteome Database

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AT5G48980.1 Galactose oxidase/kelch repeat superfamily protein

Lab Annot.

Galactose oxidase/kelch repeat protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G48990.1 11 Arabidopsis thaliana 2E-166 382 65 74 0 (0) C
AT4G39600.2 11 Arabidopsis thaliana 6E-138 372 56 71 0 (0) C
AT4G39600.1 11 Arabidopsis thaliana 1E-137 373 56 71 1 (1) _
Os02g36520.1 7 Oryza sativa 1E-06 225 25 39 0 (0) _
Os10g21930.2 7 Oryza sativa 2E-06 207 23 37 0 (0) C
Os10g21930.1 7 Oryza sativa 2E-06 207 23 37 0 (0) C
Zm00001eb194450_P004 agpv5 Zea mays 7E-08 226 26 41 0 (0) _
Zm00001eb194450_P002 agpv5 Zea mays 7E-08 226 26 41 0 (0) _
Zm00001eb194450_P001 agpv5 Zea mays 7E-08 226 26 41 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5311(1) F-box(1) F-box-like(1) Kelch_1(4) Kelch_2(3) Kelch_6(2)
TargetP:	Cytoplasm (Class 3 C0.333; M0.087; S0.021; _0.830)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	399 aa (-cTP 351)
Molecular Weight	45.72 kDA(-cTP )
PI	9.40(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data