PPDB

 The Plant Proteome Database

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AT5G48880.1   peroxisomal 3-keto-acyl-CoA thiolase 2
Lab Annot. 3-ketoacyl-CoA thiolase 1 (PKT1 or KAT5.1)
Mapman: 11.9.4.5 lipid metabolism.lipid degradation.beta-oxidation.acylCoAthioesterase
Curated Location peroxisome (Pubmed: 17915448 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48880.2 11Arabidopsis thaliana0414100100142 (29)M
AT5G48880.4 11Arabidopsis thaliana04141001000 (0)M
AT5G48880.3 11Arabidopsis thaliana0414100100142 (29)M
Os02g57260.1 7Oryza sativa0407738732 (32)S
Os10g31950.1 7Oryza sativa0406728715 (15)S
Os01g02020.2 6Oryza sativa4E-6440536540 (0)_
Zm00001eb258950_P002 agpv5Zea mays040674870 (0)S
v1_GRMZM2G062029_P03 4a53Zea mays0406748752 (51)S
GRMZM5G848768_P02 3.21Zea mays04067487129 (46)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ACP_syn_III(3) ACP_syn_III_C(1) ketoacyl-synt(2) Thiolase_C(1) Thiolase_N(1)
TargetP: Cytoplasm (Class 4 C0.069; M0.064; S0.341; _0.703)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 414 aa (-cTP 341)
Molecular Weight 43.17 kDA(-cTP )
PI 6.61(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15815986(Silique)
17951448(peroxisome (leaves))
19200160(flower-stage 12)
20118269(developing seeds)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19329564(peroxisomes (leaf))
21173025(root proteome)

Comparative Proteomics Data

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