PPDB

The Plant Proteome Database

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AT5G48800.1   Phototropic-responsive NPH3 family protein

Lab Annot. phototropic-responsive NPH3 protein
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G08570.1 11Arabidopsis thaliana3E-16757847650 (0)C
AT1G03010.1 11Arabidopsis thaliana6E-16761745642 (2)M
AT1G03010.3 11Arabidopsis thaliana2E-16562845630 (0)_
Os12g02540.1 7Oryza sativa059948660 (0)C
Os11g02620.1 7Oryza sativa060548660 (0)C
Os03g22600.1 7Oryza sativa3E-14959142600 (0)M
GRMZM2G058531_P05 3.21Zea mays2E-16961445640 (0)C
Zm00001eb405800_P001 agpv5Zea mays2E-16961445640 (0)C
Zm00001eb394770_P001 agpv5Zea mays1E-15561940610 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) Cnn_1N(2) NPH3(1)
TargetP: Cytoplasm (Class 5 C0.097; M0.369; S0.032; _0.379)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 614 aa (-cTP 542)
Molecular Weight 69.55 kDA(-cTP )
PI 6.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
20843791(DRM-enriched plasmamembrane)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help