PPDB

PPDB	The Plant Proteome Database

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AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G53170.4 11 Arabidopsis thaliana 1E-125 419 45 66 0 (0) _
AT3G53170.1 11 Arabidopsis thaliana 3E-124 411 45 66 0 (0) C
AT3G53170.2 11 Arabidopsis thaliana 3E-124 411 45 66 0 (0) C
Os06g07550.1 7 Oryza sativa 0 412 70 85 0 (0) C
Os03g02430.1 7 Oryza sativa 2E-124 402 44 67 0 (0) M
Os03g19650.3 7 Oryza sativa 5E-109 480 38 54 13 (13) C
GRMZM2G071162_P01 3.21 Zea mays 0 412 69 84 15 (15) C
v1_GRMZM2G071162_P01 4a53 Zea mays 0 412 69 84 11 (11) C
Zm00001eb281690_P001 agpv5 Zea mays 0 412 69 84 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) BKACE(2) Clathrin(4) Clr5(2) ECSIT(3) Hira(1) MRP-S27(3) Mtf2(4) PPR(10
TargetP:	Chloroplast (Class 3 C0.800; M0.219; S0.014; _0.054)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	508 aa (-cTP 480)
Molecular Weight	58.29 kDA(-cTP 55.19)
PI	9.20(-cTP 9.05)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data