PPDB

PPDB	The Plant Proteome Database

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AT5G48655.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G48655.2 11 Arabidopsis thaliana 1E-146 203 100 100 0 (0) _
AT5G48655.5 11 Arabidopsis thaliana 1E-146 203 100 100 0 (0) _
AT5G48655.6 11 Arabidopsis thaliana 1E-146 203 100 100 0 (0) _
Os09g32690.2 7 Oryza sativa 8E-21 187 35 51 0 (0) M
Os09g32690.1 7 Oryza sativa 8E-21 187 35 51 0 (0) M
Os09g32690.3 7 Oryza sativa 8E-21 187 35 51 0 (0) M
Zm00001eb317590_P001 agpv5 Zea mays 1E-21 198 37 48 0 (0) C
Zm00001eb143350_P006 agpv5 Zea mays 4E-20 229 29 46 0 (0) _
Zm00001eb143350_P005 agpv5 Zea mays 4E-20 229 29 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(2) Rtf2(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-
TargetP:	Cytoplasm (Class 4 C0.028; M0.482; S0.007; _0.796)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	203 aa (-cTP 193)
Molecular Weight	22.30 kDA(-cTP )
PI	9.39(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data