PPDB

PPDB	The Plant Proteome Database

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AT5G48650.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein

Lab Annot.

Nuclear transport factor 2 (NTF2) protein with RNA binding (RRM-RBD-RNP motifs) domain
Mapman: 29.3.1 protein.targeting.nucleus

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G25150.1 11 Arabidopsis thaliana 3E-72 435 37 51 10 (8) _
AT3G25150.2 11 Arabidopsis thaliana 4E-71 428 37 52 11 (9) C
AT5G60980.2 11 Arabidopsis thaliana 2E-50 411 34 49 154 (56) _
Os02g29480.1 7 Oryza sativa 2E-58 453 34 46 17 (17) _
Os03g30550.1 7 Oryza sativa 2E-51 450 34 50 1 (1) _
Os04g30430.1 7 Oryza sativa 1E-48 433 33 48 29 (29) C
Zm00001eb086160_P002 agpv5 Zea mays 1E-62 415 38 51 0 (0) C
v1_GRMZM2G069174_P02 4a53 Zea mays 1E-62 415 38 51 5 (5) C
Zm00001eb086160_P001 agpv5 Zea mays 2E-59 438 36 50 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NTF2(1) RRM_1(2)
TargetP:	Secreted (Class 5 C0.019; M0.080; S0.582; _0.566)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	458 aa (-cTP 454)
Molecular Weight	50.07 kDA(-cTP )
PI	5.26(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data