PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G48600.1   structural maintenance of chromosome 3

Lab Annot. ATSMC3 (STRUCTURAL MAINTENANCE OF CHROMOSOME 3); ATP binding
Mapman: 31.2 cell.division
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48600.2 11Arabidopsis thaliana0124499992 (1)_
AT3G54670.1 11Arabidopsis thaliana2E-771316254714 (4)_
AT3G54670.3 10Arabidopsis thaliana1E-741333254713 (3)_
Os05g41750.1 7Oryza sativa047770832 (2)_
Os01g67740.1 7Oryza sativa2E-43127624442 (2)_
Os12g44390.1 7Oryza sativa2E-2760823442 (2)_
Zm00001eb291710_P001 agpv5Zea mays0123468830 (0)M
v1_GRMZM2G383623_P01 4a53Zea mays0113365812 (2)_
GRMZM2G383623_P01 3.21Zea mays0113464812 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_15(1) AAA_21(3) AAA_22(2) AAA_29(1) ABC_tran(1) Crescentin(4) DHR10(9) DUF46
TargetP: Cytoplasm (Class 2 C0.122; M0.181; S0.016; _0.916)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1241 aa (-cTP 1161)
Molecular Weight 141.13 kDA(-cTP )
PI 6.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help