PPDB

 The Plant Proteome Database

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AT5G48540.1   receptor-like protein kinase-related family protein
Lab Annot. 33 kDa secretory protein-related
Mapman: 35.2 not assigned.unknown
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G22060.1 11Arabidopsis thaliana8E-39207375248 (22)S
AT4G05200.1 11Arabidopsis thaliana2E-3123530460 (0)S
AT4G05200.2 11Arabidopsis thaliana2E-3123530460 (0)_
Os03g16950.1 7Oryza sativa8E-6824446630 (0)S
Os03g16960.1 7Oryza sativa7E-6624944610 (0)S
Os08g04240.1 7Oryza sativa3E-5320642610 (0)S
GRMZM2G043878_P01 3.21Zea mays6E-6822547656 (6)S
v1_GRMZM2G043878_P01 4a53Zea mays6E-68225476530 (30)S
Zm00001eb012570_P001 agpv5Zea mays1E-6722547650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Stress-antifung(2)
TargetP: Secreted (Class 1 C0.062; M0.016; S0.925; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 263 aa (-cTP 215)
Molecular Weight 29.00 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1617Detail        [A. thaliana] m48
1618Detail        [A. thaliana] m48
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1621Detail        [A. thaliana] m48
1622Detail        [A. thaliana] m48
2210Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII st28
2211Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 12
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2224Detail       leaf [A. thaliana] total leaf tissue Clp P3 strep
2225Detail       leaf [A. thaliana] total leaf tissue Clp P3 trap
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help