PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G48470.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g23790.1 7Oryza sativa4E-17431774886 (6)C
Os11g23790.2 7Oryza sativa4E-17431774886 (6)C
Os11g23790.3 7Oryza sativa3E-15328574886 (6)C
Zm00001eb169280_P001 agpv5Zea mays1E-17431773880 (0)C
v1_GRMZM2G079452_P02 4a53Zea mays3E-17431773886 (6)C
v1_GRMZM2G079452_P01 4a53Zea mays3E-17431773886 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DDE_Tnp_2(1)
TargetP: Chloroplast (Class 3 C0.776; M0.207; S0.042; _0.091)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 397 aa (-cTP 345) (-lTP 275)
Molecular Weight 44.01 kDA(-cTP 38.06)(-lTP 30.24)
PI 5.81(-cTP 5.13)(-lTP 6.377)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help