PPDB

PPDB	The Plant Proteome Database

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AT5G48385.1 FRIGIDA-like protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G14900.1 11 Arabidopsis thaliana 4E-50 551 28 48 0 (0) _
AT3G22440.1 11 Arabidopsis thaliana 9E-49 549 28 47 0 (0) _
AT1G31814.1 11 Arabidopsis thaliana 2E-40 356 29 53 0 (0) C
Os09g07380.1 7 Oryza sativa 1E-177 565 50 65 0 (0) _
Os09g07360.1 7 Oryza sativa 1E-172 569 50 65 0 (0) _
Os09g07360.2 7 Oryza sativa 2E-168 553 50 65 0 (0) _
GRMZM2G160316_P02 3.21 Zea mays 6E-179 574 50 65 0 (0) _
v1_GRMZM2G160316_P02 4a53 Zea mays 6E-179 574 50 65 0 (0) _
Zm00001eb308380_P003 agpv5 Zea mays 6E-179 574 50 65 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4407(1) DUF5713(2) Frigida(1) Lant_dehydr_C(1) NDUF_B5(1) OmpH(1) Snf7(2)
TargetP:	Cytoplasm (Class 3 C0.204; M0.115; S0.108; _0.781)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	558 aa (-cTP 523)
Molecular Weight	62.61 kDA(-cTP )
PI	6.60(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data