PPDB

 The Plant Proteome Database

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AT5G48335.1   hypothetical protein
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07580.2 11Arabidopsis thaliana2E-3711056700 (0)C
AT3G07580.1 11Arabidopsis thaliana2E-3711056700 (0)C
Os02g39630.3 7Oryza sativa3E-1910642610 (0)_
Os02g39630.2 7Oryza sativa5E-1910642610 (0)_
Os02g39630.1 7Oryza sativa5E-1910642610 (0)_
GRMZM2G012841_P01 3.21Zea mays3E-1611338580 (0)C
GRMZM2G012841_P09 3.21Zea mays3E-1611338580 (0)C
Zm00001eb246760_P001 agpv5Zea mays3E-1611338580 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Chloroplast (Class 1 C0.982; M0.034; S0.012; _0.095)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 114 aa (-cTP 67)
Molecular Weight 12.78 kDA(-cTP 7.55)
PI 9.35(-cTP 5.48)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help