PPDB

PPDB	The Plant Proteome Database

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AT5G48250.1 B-box type zinc finger protein with CCT domain-containing protein

Lab Annot.

zinc finger (B-box type) protein, similarity to CONSTANS
Mapman: 27.3.7 RNA.regulation of transcription.C2C2(Zn) CO-like, Constans-like zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G07650.1 11 Arabidopsis thaliana 0 389 68 77 0 (0) _
AT3G07650.3 11 Arabidopsis thaliana 0 389 68 77 0 (0) _
AT3G07650.4 11 Arabidopsis thaliana 0 389 68 77 0 (0) _
Os02g49230.5 7 Oryza sativa 3E-111 414 52 64 0 (0) _
Os02g49230.4 7 Oryza sativa 8E-110 415 52 64 0 (0) _
Os02g49230.3 7 Oryza sativa 8E-110 415 52 64 0 (0) _
Zm00001eb380990_P002 agpv5 Zea mays 1E-118 422 48 62 0 (0) C
Zm00001eb380990_P004 agpv5 Zea mays 2E-118 423 48 61 0 (0) C
Zm00001eb380990_P005 agpv5 Zea mays 2E-118 423 48 61 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CCT(1) CEBP_ZZ(2) zf-B_box(2)
TargetP:	Cytoplasm (Class 4 C0.279; M0.057; S0.015; _0.530)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	373 aa (-cTP 314)
Molecular Weight	41.24 kDA(-cTP )
PI	5.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1415	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.1	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data