PPDB

The Plant Proteome Database

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AT5G48240.1   Rrp15p protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48240.3 11Arabidopsis thaliana035686861 (1)_
AT5G48240.2 11Arabidopsis thaliana027994941 (1)_
Os11g16480.1 7Oryza sativa2E-6727048610 (0)C
Os11g16480.2 7Oryza sativa1E-5622548620 (0)C
GRMZM2G120575_P01 3.21Zea mays2E-6327047600 (0)C
v1_GRMZM2G120575_P01 4a53Zea mays2E-6327047600 (0)C
Zm00001eb298370_P002 agpv5Zea mays2E-6327047600 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rrp15p(2) Tnp_P_element_C(2)
TargetP: Cytoplasm (Class 4 C0.474; M0.132; S0.033; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 309 aa (-cTP 263)
Molecular Weight 34.48 kDA(-cTP )
PI 8.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help