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AT5G48220.2
Aldolase-type TIM barrel family protein
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| Lab Annot. |
indole-3-glycerol phosphate synthase (IGPS)
Mapman: 13.1.6.5.4 amino acid metabolism.synthesis.aromatic aa.tryptophan.indole-3-glycerol phosphate synthase |
| Curated Location |
plastid stroma (Pubmed: 23198870 18431481 ) (supported by in-house exprements)
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
His_biosynth(2) IGPS(1) NanE(2) ThiG(2) |
| TargetP: |
Cytoplasm (Class 4 C0.072; M0.329; S0.032; _0.718) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
316 aa (-cTP 283) |
| Molecular Weight |
35.21 kDA(-cTP ) |
| PI |
5.65(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 528 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (wt2) |
| 870 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 871 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 873 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 874 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1127 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast plastoglobule | k2k3 |
| 1292 | Detail | | | | | | | | leaf [A. thaliana] | co-IP cGEP (rep. 1) stroma | wild-type |
| 1294 | Detail | | | | | | | | leaf [A. thaliana] | co-IP cGEP (rep. 2) stroma | wild-type |
| 1346 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 2) |
| 1347 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 3) |
| 1348 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 1) |
| 1402 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | wild-type |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1406 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1448 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (3 day HL) | abck2xabck3 (rep. 1) |
| 1483 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 2) |
| 1485 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type (rep. 3) |
| 1528 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast nucleoid | wild-type (rep. 1) |
| 1941 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1942 | Detail | | | | | | | | leaf [A. thaliana] | stroma WT stroma | wild-type |
| 1944 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | UVR |
| 1946 | Detail | | | | | | | | leaf [A. thaliana] | stroma UVR stroma | wild-type |
| 1984 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1985 | Detail | | | | | | | | leaf [A. thaliana] | plastid | wild-type |
| 1988 | Detail | | | | | | | | leaf [A. thaliana] | plastid | Prep1_Prep2 |
| 2010 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1 |
| 2013 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wt |
| 2017 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 2113 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2114 | Detail | | | | | | | | leaf [A. thaliana] | Stroma stroma | wt |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2400 | Detail | | | | | | | | leaf-soluble [A. thaliana] | GFP-nano-trap | wt/DUF760-1GFP/ClpC1TRAPSTREP |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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18538804(total leaf)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20423899(chloroplast)
19995723(chloroplast reference proteome)
21173025(root proteome)
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Comparative Proteomics Data
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