PPDB

PPDB	The Plant Proteome Database

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AT5G48160.1 potyvirus VPg interacting protein (DUF1423)

Lab Annot.

unknown function (DUF1423)
Mapman: 31.1 cell.organisation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G48160.2 11 Arabidopsis thaliana 0 574 100 100 0 (0) C
AT3G07780.1 11 Arabidopsis thaliana 0 582 76 86 0 (0) C
AT3G07780.3 11 Arabidopsis thaliana 0 582 76 86 0 (0) C
Os12g32980.1 7 Oryza sativa 0 621 54 70 0 (0) C
Os11g41880.1 7 Oryza sativa 3E-91 316 47 67 0 (0) M
Os03g13590.1 7 Oryza sativa 1E-90 443 37 57 0 (0) _
v1_GRMZM2G168476_P01 4a53 Zea mays 0 614 53 70 1 (1) C
Zm00001eb115250_P001 agpv5 Zea mays 0 614 53 70 0 (0) C
GRMZM2G168476_P01 3.21 Zea mays 0 614 53 70 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2514(1) ERM(2) Oberon_cc(1) PHD(1) PHD_Oberon(1)
TargetP:	Chloroplast (Class 5 C0.616; M0.435; S0.013; _0.072)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	574 aa (-cTP 557)
Molecular Weight	65.08 kDA(-cTP 63.27)
PI	6.43(-cTP 6.21)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data