PPDB

PPDB	The Plant Proteome Database

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AT5G48140.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G07820.1 11 Arabidopsis thaliana 0 386 78 90 0 (0) S
AT3G07830.1 11 Arabidopsis thaliana 0 393 77 90 0 (0) S
AT3G07840.1 11 Arabidopsis thaliana 0 386 76 87 1 (1) S
Os06g35320.1 7 Oryza sativa 2E-97 354 41 61 0 (0) S
Os06g35370.1 7 Oryza sativa 2E-97 354 41 61 0 (0) S
Os06g40880.1 7 Oryza sativa 1E-95 375 38 60 0 (0) S
GRMZM2G153666_P02 3.21 Zea mays 7E-108 360 42 65 0 (0) S
Zm00001eb275910_P001 agpv5 Zea mays 7E-108 360 42 65 0 (0) S
v1_GRMZM2G153666_P02 4a53 Zea mays 7E-108 360 42 65 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(3) DUF4135(1) Glyco_hydro_28(1) Pectate_lyase_3(2)
TargetP:	Secreted (Class 1 C0.013; M0.065; S0.943; _0.019)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	395 aa (-cTP 353)
Molecular Weight	42.52 kDA(-cTP )
PI	9.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19546170(mature pollen grains)

Comparative Proteomics Data