PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G48120.1 ARM repeat superfamily protein

Lab Annot.

unknown protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G48120.3 11 Arabidopsis thaliana 0 1134 100 100 0 (0) _
AT5G48120.2 11 Arabidopsis thaliana 0 1134 100 100 0 (0) _
Os07g08050.1 7 Oryza sativa 5E-117 661 37 58 4 (4) _
Zm00001eb301230_P002 agpv5 Zea mays 0 1156 37 57 0 (0) _
Zm00001eb301230_P001 agpv5 Zea mays 0 1156 37 57 0 (0) _
AC214119.3_FGP009 3.21 Zea mays 3E-160 960 35 55 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C_GCAxxG_C_C(2) HEAT(2) MMS19_C(4) MMS19_N(1)
TargetP:	Cytoplasm (Class 5 C0.348; M0.125; S0.059; _0.497)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1134 aa (-cTP 1087)
Molecular Weight	124.25 kDA(-cTP )
PI	5.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
2286	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data