PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G48090.1   EDM2-like protein1
Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G48090.3 11Arabidopsis thaliana06361001000 (0)_
AT5G48090.2 11Arabidopsis thaliana06361001000 (0)_
AT5G55390.1 11Arabidopsis thaliana5E-10330654691 (1)_
Os08g39250.1 7Oryza sativa2E-10534452650 (0)_
Os01g32720.1 7Oryza sativa9E-9730353680 (0)_
Os08g24946.1 7Oryza sativa8E-8532448641 (1)_
Zm00001eb199620_P002 agpv5Zea mays9E-14360641570 (0)_
Zm00001eb199620_P001 agpv5Zea mays9E-13860641570 (0)_
Zm00001eb199620_P003 agpv5Zea mays6E-12560639540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cript(1) zf-HC5HC2H(2) zf-HC5HC2H_2(3)
TargetP: Cytoplasm (Class 2 C0.054; M0.137; S0.183; _0.806)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 677 aa (-cTP 650)
Molecular Weight 77.03 kDA(-cTP )
PI 5.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help