PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G47880.1 eukaryotic release factor 1-1

Lab Annot.

eukaryotic release factor 1 protein / eRF1 protein
Mapman: 29.2.5 protein.synthesis.release

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G47880.2 11 Arabidopsis thaliana 0 436 100 100 13 (6) _
AT3G26618.1 11 Arabidopsis thaliana 0 434 86 92 22 (12) _
AT1G12920.1 11 Arabidopsis thaliana 0 427 87 93 46 (19) _
Os03g49580.1 7 Oryza sativa 0 437 86 93 1 (1) _
Os07g39870.2 7 Oryza sativa 0 437 86 93 14 (14) _
Os07g39870.3 7 Oryza sativa 0 437 86 93 14 (14) _
Zm00001eb108120_P001 agpv5 Zea mays 0 424 87 94 0 (0) _
v1_GRMZM2G090274_P02 4a53 Zea mays 0 424 87 94 33 (33) _
v1_GRMZM2G090274_P01 4a53 Zea mays 0 424 87 94 33 (33) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	acVLRF1(1) baeRF_family10(1) eRF1_1(1) eRF1_2(1) eRF1_3(1)
TargetP:	Cytoplasm (Class 2 C0.084; M0.135; S0.028; _0.901)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	436 aa (-cTP 360)
Molecular Weight	48.72 kDA(-cTP )
PI	5.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1018	Detail								[aphid]
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1494	Detail								leaf [A. thaliana]
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data