PPDB

PPDB	The Plant Proteome Database

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AT5G47720.1 Thiolase family protein

Lab Annot.

acetoacetyl-CoA thiolase 1 (AACT1) (MVA-step 1)
Mapman: 16.1.2.1 secondary metabolism.isoprenoids.mevalonate pathway.acetyl-CoA C-acyltransferase

Curated Location

cytosol (Pubmed: 17120136 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G47720.2 11 Arabidopsis thaliana 0 405 100 100 16 (16) _
AT5G47720.4 11 Arabidopsis thaliana 0 405 100 100 16 (16) _
AT5G47720.3 11 Arabidopsis thaliana 0 405 100 100 16 (16) _
Os09g07830.2 7 Oryza sativa 0 400 77 90 28 (28) _
Os09g07830.1 7 Oryza sativa 0 400 77 90 28 (28) _
Os01g02020.1 7 Oryza sativa 0 407 74 88 0 (0) _
GRMZM5G866758_P02 3.21 Zea mays 0 400 76 89 47 (19) _
Zm00001eb334430_P003 agpv5 Zea mays 0 396 76 87 0 (0) C
Zm00001eb334430_P006 agpv5 Zea mays 0 396 76 87 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ketoacyl-synt(3) SpoVAD(2) Thiolase_C(1) Thiolase_N(2)
TargetP:	Cytoplasm (Class 2 C0.134; M0.066; S0.028; _0.819)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	405 aa (-cTP 359)
Molecular Weight	42.24 kDA(-cTP )
PI	6.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1044	Detail								leaf [A. thaliana]	plastid - coIP control
1124	Detail								leaf [A. thaliana]	chloroplast plastoglobule	wild-type
1125	Detail								leaf [A. thaliana]	chloroplast plastoglobule	k2k3
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data