PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G47660.1 Homeodomain-like superfamily protein

Lab Annot.

Mapman: 27.3.30 RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G28300.1 11 Arabidopsis thaliana 5E-31 258 32 48 0 (0) C
AT1G76890.2 11 Arabidopsis thaliana 8E-31 233 35 52 0 (0) _
AT1G33240.3 11 Arabidopsis thaliana 2E-21 89 49 70 0 (0) _
Os04g45750.1 7 Oryza sativa 3E-34 288 33 47 2 (2) C
Os04g45750.2 7 Oryza sativa 3E-34 288 33 47 1 (1) C
Os02g01380.1 7 Oryza sativa 5E-32 218 37 58 0 (0) _
Zm00001eb209880_P001 agpv5 Zea mays 8E-33 227 36 56 0 (0) _
GRMZM2G037128_P02 3.21 Zea mays 8E-33 227 36 56 0 (0) _
v1_GRMZM2G037128_P02 4a53 Zea mays 8E-33 227 36 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GLTSCR1(2) MADF_DNA_bdg(1) Myb_DNA-bind_3(2) Myb_DNA-bind_4(1) Myb_DNA-bind_5(2)
TargetP:	Cytoplasm (Class 2 C0.118; M0.084; S0.062; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	398 aa (-cTP 333)
Molecular Weight	45.57 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data