PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G47650.1   nudix hydrolase homolog 2

Lab Annot. nudix hydrolase homolog 2
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47650.2 11Arabidopsis thaliana02781001000 (0)M
AT5G47650.4 11Arabidopsis thaliana02781001000 (0)M
AT5G47650.5 11Arabidopsis thaliana02781001000 (0)_
Os06g42790.2 7Oryza sativa2E-12028258730 (0)C
Os06g42790.1 7Oryza sativa4E-11928258730 (0)C
Os06g42790.3 7Oryza sativa3E-9019661790 (0)_
Zm00001eb275570_P002 agpv5Zea mays8E-11427456730 (0)M
Zm00001eb275570_P005 agpv5Zea mays3E-11325758750 (0)C
GRMZM2G162605_P02 3.21Zea mays3E-11325758750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NUDIX(1) Nudix_hydro(1)
TargetP: Cytoplasm (Class 5 C0.549; M0.043; S0.079; _0.665)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 278 aa (-cTP 255)
Molecular Weight 31.61 kDA(-cTP )
PI 5.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help