PPDB

 The Plant Proteome Database

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AT5G47620.3   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47620.4 11Arabidopsis thaliana037097980 (0)_
AT5G47620.2 11Arabidopsis thaliana0358991000 (0)_
AT5G47620.1 11Arabidopsis thaliana0358991000 (0)_
Os11g41890.1 7Oryza sativa6E-84249557010 (10)_
Os07g39560.3 7Oryza sativa1E-8128052660 (0)_
Os07g39560.1 7Oryza sativa1E-8128052660 (0)_
GRMZM2G013065_P01 3.21Zea mays3E-8428452684 (4)_
Zm00001eb302580_P001 agpv5Zea mays3E-8428452680 (0)_
Zm00001eb302580_P002 agpv5Zea mays3E-8428452680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: RRM_1(1) RRM_7(1) Sec3_C_2(1)
TargetP: Chloroplast (Class 4 C0.499; M0.060; S0.211; _0.288)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 371 aa (-cTP 295)
Molecular Weight 39.31 kDA(-cTP 31.12)
PI 8.96(-cTP 8.72)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help