PPDB

 The Plant Proteome Database

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AT5G47620.1   RNA-binding (RRM/RBD/RNP motifs) family protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G47620.2 11Arabidopsis thaliana04311001000 (0)_
AT5G47620.5 11Arabidopsis thaliana04311001000 (0)_
AT5G47620.4 11Arabidopsis thaliana045395950 (0)_
Os11g41890.1 7Oryza sativa9E-130322597510 (10)_
Os07g39560.3 7Oryza sativa5E-12535356690 (0)_
Os07g39560.1 7Oryza sativa5E-12535356690 (0)_
GRMZM2G013065_P01 3.21Zea mays2E-12635157724 (4)_
Zm00001eb302580_P001 agpv5Zea mays2E-12635157720 (0)_
Zm00001eb302580_P002 agpv5Zea mays2E-12635157720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Nup35_RRM_2(2) RRM_1(2) RRM_7(2) Sec3_C_2(1)
TargetP: Cytoplasm (Class 2 C0.117; M0.136; S0.054; _0.874)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 431 aa (-cTP 398)
Molecular Weight 46.13 kDA(-cTP )
PI 8.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help