PPDB

PPDB	The Plant Proteome Database

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AT5G47530.1 Auxin-responsive family protein

Lab Annot.

Cyt b561 ferric reductase, DUF568, Ammonium transporter motifs
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17280.1 11 Arabidopsis thaliana 0 393 76 86 0 (0) S
AT5G35735.1 11 Arabidopsis thaliana 2E-126 366 50 68 0 (0) S
AT3G25290.1 11 Arabidopsis thaliana 3E-126 370 50 68 0 (0) S
Os03g09900.1 7 Oryza sativa 1E-118 369 48 65 0 (0) S
Os09g32470.1 7 Oryza sativa 9E-110 364 47 65 0 (0) S
Os08g41280.1 7 Oryza sativa 8E-106 350 47 66 26 (26) S
GRMZM2G003506_P01 3.21 Zea mays 3E-114 367 47 63 0 (0) S
Zm00001eb008200_P001 agpv5 Zea mays 3E-114 367 47 63 0 (0) S
v1_GRMZM2G003506_P01 4a53 Zea mays 3E-114 367 47 63 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cytochrom_B561(1) DUF4079(2) DUF4624(1) DUF568(1) PGPGW(2) Pox_A14(3)
TargetP:	Secreted (Class 1 C0.012; M0.038; S0.992; _0.021)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	6 TMs
TAT position:
Length	395 aa (-cTP 375)
Molecular Weight	43.00 kDA(-cTP )
PI	9.53(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to siliques)

Comparative Proteomics Data