PPDB

The Plant Proteome Database

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AT5G47520.1   RAB GTPase homolog A5A

Lab Annot. RAB GTPase homolog A5A
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G31680.1 11Arabidopsis thaliana5E-9722064773 (3)_
AT2G43130.1 11Arabidopsis thaliana6E-9721562806 (6)_
AT1G05810.2 11Arabidopsis thaliana1E-9522262770 (0)C
Os07g44040.1 7Oryza sativa1E-12422179870 (0)_
Os08g41340.1 7Oryza sativa3E-97214668011 (11)_
Os09g10940.1 7Oryza sativa4E-8921957759 (9)_
GRMZM2G335738_P01 3.21Zea mays1E-12422379871 (1)_
GRMZM2G335738_P02 3.21Zea mays1E-12422379871 (1)_
v1_GRMZM2G335738_P02 4a53Zea mays1E-12422379872 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_16(1) AAA_28(1) ABC_tran(1) Arf(1) GTP_EFTU(2) Gtr1_RagA(1) MMR_HSR1(1) PduV
TargetP: Cytoplasm (Class 3 C0.039; M0.118; S0.378; _0.860)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 221 aa (-cTP 200)
Molecular Weight 24.44 kDA(-cTP )
PI 5.98(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
17151019(vacuole - suspension cell)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help