PPDB

PPDB	The Plant Proteome Database

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AT5G47460.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G09950.1 11 Arabidopsis thaliana 3E-88 538 32 53 0 (0) M
AT5G09950.3 11 Arabidopsis thaliana 3E-88 538 32 53 0 (0) M
AT5G09950.2 11 Arabidopsis thaliana 3E-88 538 32 53 0 (0) M
Os03g62690.2 7 Oryza sativa 2E-85 592 28 49 0 (0) C
Os12g36620.1 7 Oryza sativa 9E-83 566 30 49 0 (0) _
Os03g62690.1 7 Oryza sativa 1E-81 592 28 49 0 (0) C
v1_GRMZM2G153275_P01 4a53 Zea mays 6E-82 571 28 50 0 (0) _
v1_GRMZM2G153275_P02 4a53 Zea mays 6E-82 571 28 50 0 (0) _
GRMZM2G153275_P01 3.21 Zea mays 6E-82 571 28 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(3) MRP-S27(1) PPR(12) PPR_1(10) PPR_2(9) PPR_3(8) PPR_long(4) TPR_14(2)
TargetP:	Mitochondria (Class 4 C0.367; M0.726; S0.042; _0.076)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	576 aa (-cTP 547)
Molecular Weight	64.40 kDA(-cTP )
PI	6.79(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data