PPDB

 The Plant Proteome Database

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AT5G47450.1   tonoplast intrinsic protein 2%3B3
Lab Annot. ammonia transporter, tonoplast intrinsic protein (TIP2;3)
Mapman: 34.19.2 transport.Major Intrinsic Proteins.TIP
Curated Location vacuole-tonoplast (Pubmed: 19922653 )

TAIR curated location: vacuolar membrane (sensu Magnoliophyta)15665250
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17340.1 11Arabidopsis thaliana3E-1512479397117 (117)S
AT3G16240.1 11Arabidopsis thaliana2E-12824376861053 (1037)S
AT3G26520.1 11Arabidopsis thaliana6E-1002486176862 (822)_
Os02g44080.1 7Oryza sativa1E-12824778910 (0)S
Os06g22960.1 7Oryza sativa2E-1152467182257 (257)_
Os03g05290.1 7Oryza sativa2E-902466374126 (126)_
v1_GRMZM2G121275_P01 4a53Zea mays2E-13524778898 (8)S
Zm00001eb074660_P002 agpv5Zea mays2E-13524778890 (0)S
Zm00001eb074660_P001 agpv5Zea mays2E-13524778890 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF5122(3) MIP(1)
TargetP: Secreted (Class 5 C0.007; M0.059; S0.624; _0.619)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 250 aa (-cTP 217)
Molecular Weight 25.25 kDA(-cTP )
PI 5.21(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help