PPDB

The Plant Proteome Database

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AT5G47440.1   auxin canalization protein (DUF828)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17350.1 11Arabidopsis thaliana040479850 (0)_
AT4G16670.1 11Arabidopsis thaliana9E-9540845640 (0)_
AT4G16670.2 11Arabidopsis thaliana1E-7133046630 (0)_
Os02g44040.1 7Oryza sativa2E-7339443590 (0)M
Os10g41060.1 7Oryza sativa8E-6737043600 (0)_
Os03g43510.1 7Oryza sativa3E-2823936540 (0)_
Zm00001eb186550_P001 agpv5Zea mays6E-6339643560 (0)_
v1_GRMZM2G027052_P01 4a53Zea mays6E-6339643561 (1)_
GRMZM2G027052_P01 3.21Zea mays3E-6139843561 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_canalis(2) DUF4826(1) PH_2(1)
TargetP: Cytoplasm (Class 2 C0.288; M0.027; S0.017; _0.931)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 406 aa (-cTP 346)
Molecular Weight 44.93 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help