PPDB

The Plant Proteome Database

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AT5G47420.1   Tryptophan RNA-binding attenuator protein-like protein

Lab Annot. unknown protein DUF124 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G17420.1 11Arabidopsis thaliana028587930 (0)_
AT4G17420.3 11Arabidopsis thaliana2E-15926285900 (0)_
AT4G17420.2 11Arabidopsis thaliana2E-14824884900 (0)_
Os03g53600.1 7Oryza sativa3E-12628360790 (0)_
Os03g53600.3 7Oryza sativa1E-10324658780 (0)_
Os03g53600.2 7Oryza sativa3E-7817263800 (0)_
GRMZM2G025906_P02 3.21Zea mays4E-12928361803 (3)_
Zm00001eb057110_P002 agpv5Zea mays4E-12928361800 (0)_
v1_GRMZM2G025906_P02 4a53Zea mays4E-12928361804 (3)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AIM24(1)
TargetP: Cytoplasm (Class 3 C0.028; M0.226; S0.087; _0.801)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 282 aa (-cTP 246)
Molecular Weight 30.57 kDA(-cTP )
PI 6.15(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help